Program Listing for File JSONGraphWriter.cpp
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#include "flamegpu/io/JSONGraphWriter.h"
#include <rapidjson/writer.h>
#include <rapidjson/prettywriter.h>
#include <rapidjson/stringbuffer.h>
#include <fstream>
#include "flamegpu/exception/FLAMEGPUException.h"
#include "flamegpu/simulation/detail/CUDAEnvironmentDirectedGraphBuffers.cuh"
namespace flamegpu {
namespace io {
namespace {
template<typename T>
void writeAnyVertex(T &writer, const std::pair<std::string, Variable> &var, const unsigned int index, const std::shared_ptr<const detail::CUDAEnvironmentDirectedGraphBuffers>& directed_graph, cudaStream_t stream) {
// Output value
if (var.second.elements > 1) {
writer->StartArray();
}
// Loop through elements, to construct array
size_type foo = 0;
for (unsigned int el = 0; el < var.second.elements; ++el) {
if (var.second.type == std::type_index(typeid(float))) {
writer->Double(directed_graph->getVertexPropertyBuffer<float>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(double))) {
writer->Double(directed_graph->getVertexPropertyBuffer<double>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int64_t))) {
writer->Int64(directed_graph->getVertexPropertyBuffer<int64_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint64_t))) {
writer->Uint64(directed_graph->getVertexPropertyBuffer<uint64_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int32_t))) {
writer->Int(directed_graph->getVertexPropertyBuffer<int32_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint32_t))) {
writer->Uint(directed_graph->getVertexPropertyBuffer<uint32_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int16_t))) {
writer->Int(directed_graph->getVertexPropertyBuffer<int16_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint16_t))) {
writer->Uint(directed_graph->getVertexPropertyBuffer<uint16_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int8_t))) {
writer->Int(static_cast<int32_t>(directed_graph->getVertexPropertyBuffer<int8_t>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else if (var.second.type == std::type_index(typeid(uint8_t))) {
writer->Uint(static_cast<uint32_t>(directed_graph->getVertexPropertyBuffer<uint8_t>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else if (var.second.type == std::type_index(typeid(char))) {
writer->Int(static_cast<int32_t>(directed_graph->getVertexPropertyBuffer<char>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else {
THROW exception::RapidJSONError("Attempting to export value of unsupported type '%s', "
"in JsonGraphWriter::writeAny()\n", var.second.type.name());
}
}
if (var.second.elements > 1) {
writer->EndArray();
}
}
template<typename T>
void writeAnyEdge(T &writer, const std::pair<std::string, Variable> &var, const unsigned int index, const std::shared_ptr<const detail::CUDAEnvironmentDirectedGraphBuffers>& directed_graph, cudaStream_t stream) {
// Output value
if (var.second.elements > 1) {
writer->StartArray();
}
// Loop through elements, to construct array
size_type foo = 0;
for (unsigned int el = 0; el < var.second.elements; ++el) {
if (var.second.type == std::type_index(typeid(float))) {
writer->Double(directed_graph->getEdgePropertyBuffer<float>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(double))) {
writer->Double(directed_graph->getEdgePropertyBuffer<double>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int64_t))) {
writer->Int64(directed_graph->getEdgePropertyBuffer<int64_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint64_t))) {
writer->Uint64(directed_graph->getEdgePropertyBuffer<uint64_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int32_t))) {
writer->Int(directed_graph->getEdgePropertyBuffer<int32_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint32_t))) {
writer->Uint(directed_graph->getEdgePropertyBuffer<uint32_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int16_t))) {
writer->Int(directed_graph->getEdgePropertyBuffer<int16_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(uint16_t))) {
writer->Uint(directed_graph->getEdgePropertyBuffer<uint16_t>(var.first, foo, stream)[var.second.elements * index + el]);
} else if (var.second.type == std::type_index(typeid(int8_t))) {
writer->Int(static_cast<int32_t>(directed_graph->getEdgePropertyBuffer<int8_t>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else if (var.second.type == std::type_index(typeid(uint8_t))) {
writer->Uint(static_cast<uint32_t>(directed_graph->getEdgePropertyBuffer<uint8_t>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else if (var.second.type == std::type_index(typeid(char))) {
writer->Int(static_cast<int32_t>(directed_graph->getEdgePropertyBuffer<char>(var.first, foo, stream)[var.second.elements * index + el])); // Char outputs weird if being used as an integer
} else {
THROW exception::RapidJSONError("Attempting to export value of unsupported type '%s', "
"in JsonGraphWriter::writeAny()\n", var.second.type.name());
}
}
if (var.second.elements > 1) {
writer->EndArray();
}
}
template<typename T>
void toAdjancencyLike(T& writer, const std::shared_ptr<const detail::CUDAEnvironmentDirectedGraphBuffers>& directed_graph, cudaStream_t stream) {
const EnvironmentDirectedGraphData &data = directed_graph->getDescription();
// Begin json output object
writer->StartObject();
{
// Vertices
writer->Key("nodes");
writer->StartArray();
for (unsigned int i = 0; i < directed_graph->getVertexCount(); ++i) {
writer->StartObject();
// Reserved members first
writer->Key("id");
size_type foo = 0;
writer->String(std::to_string(directed_graph->getVertexPropertyBuffer<id_t>(ID_VARIABLE_NAME, foo, stream)[i]).c_str());
// Custom members after
for (const auto &j : data.vertexProperties) {
if (j.first[0] != '_') {
writer->Key(j.first.c_str());
writeAnyVertex(writer, j, i, directed_graph, stream);
if (i == 0 && j.first == "id" && j.first != ID_VARIABLE_NAME) {
fprintf(stderr, "Warning: Graph vertices contain both 'id' and '%s' properties, export may be invalid.\n", ID_VARIABLE_NAME);
}
}
}
writer->EndObject();
}
writer->EndArray();
// Edges
writer->Key("links");
writer->StartArray();
for (unsigned int i = 0; i < directed_graph->getEdgeCount(); ++i) {
writer->StartObject();
// Reserved members first
size_type foo = 0;
const id_t *src_dest_buffer = directed_graph->getEdgePropertyBuffer<id_t>(GRAPH_SOURCE_DEST_VARIABLE_NAME, foo, stream);
writer->Key("source");
writer->String(std::to_string(src_dest_buffer[i * 2 + 1]).c_str());
writer->Key("target");
writer->String(std::to_string(src_dest_buffer[i * 2 + 0]).c_str());
// Custom members after
for (const auto& j : data.edgeProperties) {
if (j.first[0] != '_') {
writer->Key(j.first.c_str());
writeAnyEdge(writer, j, i, directed_graph, stream);
if (i == 0 && j.first == "source") {
fprintf(stderr, "Warning: Graph edges contain both 'source' and '%s' properties, export may be invalid.\n", GRAPH_SOURCE_DEST_VARIABLE_NAME);
} else if (i == 0 && j.first == "target") {
fprintf(stderr, "Warning: Graph edges contain both 'target' and '%s' properties, export may be invalid.\n", GRAPH_SOURCE_DEST_VARIABLE_NAME);
}
}
}
writer->EndObject();
}
writer->EndArray();
}
// End Json file
writer->EndObject();
}
} // namespace
void JSONGraphWriter::saveAdjacencyLike(const std::string& filepath,
const std::shared_ptr<const detail::CUDAEnvironmentDirectedGraphBuffers>& directed_graph, cudaStream_t stream, bool pretty_print) {
// Init writer
rapidjson::StringBuffer s;
if (pretty_print) {
// rapidjson::Writer doesn't have virtual methods, so can't pass rapidjson::PrettyWriter around as ptr to rapidjson::writer
auto writer = new rapidjson::PrettyWriter<rapidjson::StringBuffer, rapidjson::UTF8<>, rapidjson::UTF8<>, rapidjson::CrtAllocator, rapidjson::kWriteNanAndInfFlag>(s);
writer->SetIndent('\t', 1);
toAdjancencyLike(writer, directed_graph, stream);
delete writer;
} else {
auto* writer = new rapidjson::Writer<rapidjson::StringBuffer, rapidjson::UTF8<>, rapidjson::UTF8<>, rapidjson::CrtAllocator, rapidjson::kWriteNanAndInfFlag>(s);
toAdjancencyLike(writer, directed_graph, stream);
delete writer;
}
// Perform output
std::ofstream out(filepath, std::ofstream::trunc);
if (!out.is_open()) {
THROW exception::InvalidFilePath("Unable to open file '%s' for writing\n", filepath.c_str());
}
out << s.GetString();
out << "\n";
out.close();
}
} // namespace io
} // namespace flamegpu